Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3472147_01517 | Not Available | Positive | 1625261 - 1626034 | 28610.8 |
| transposase | SAMEA3472147_01518 | Not Available | Positive | 1626231 - 1626560 | 12563.1 |
| is1 transposase | SAMEA3472147_01519 | Not Available | Positive | 1626589 - 1626864 | 9902.97 |
| is1 transposase | SAMEA3472147_01520 | Not Available | Positive | 1626909 - 1627286 | 14888.2 |
| transposase | SAMEA3472147_01521 | Not Available | Positive | 1627314 - 1627898 | 22330.1 |
| nad(p)-binding rossmann-fold domain | SAMEA3472147_01522 | Not Available | Negative | 1627946 - 1628839 | 32718.7 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMEA3472147_01523 | Not Available | Negative | 1628860 - 1629222 | 14082.8 |
| putative glutathione s-transferase | SAMEA3472147_01524 | Not Available | Negative | 1629279 - 1629926 | 24445.2 |
| putative glutathione s-transferase | SAMEA3472147_01525 | Not Available | Positive | 1630062 - 1630706 | 24341.0 |
| putative phosphodiesterase | SAMEA3472147_01526 | Not Available | Positive | 1630762 - 1631313 | 19992.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





