Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylcoa carboxylase | SAMEA3472147_01507 | Not Available | Positive | 1615572 - 1616486 | 33323.9 |
| bifunctional folc protein | SAMEA3472147_01508 | Not Available | Positive | 1616556 - 1617824 | 45423.2 |
| putative peptidoglycan-binding protein | SAMEA3472147_01509 | Not Available | Positive | 1617814 - 1618476 | 22939.8 |
| colicin v production protein | SAMEA3472147_01510 | Not Available | Positive | 1619008 - 1619496 | 17991.0 |
| amidophosphoribosyltransferase | SAMEA3472147_01511 | Not Available | Positive | 1619533 - 1621050 | 56505.3 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | SAMEA3472147_01512 | Not Available | Positive | 1621145 - 1621714 | 20696.3 |
| lysine-arginine-ornithine-binding periplasmic protein | SAMEA3472147_01513 | Not Available | Positive | 1621979 - 1622761 | 27949.0 |
| histidine abc transporter, substrate-binding periplasmic protein | SAMEA3472147_01514 | Not Available | Positive | 1622982 - 1623764 | 28484.9 |
| histidine abc transporter permease | SAMEA3472147_01515 | Not Available | Positive | 1623854 - 1624540 | 24634.8 |
| histidine transport system permease hism | SAMEA3472147_01516 | Not Available | Positive | 1624537 - 1625253 | 26901.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





