Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporting atpase | SAMEA3472147_01497 | Not Available | Positive | 1604737 - 1605285 | 21146.6 |
| protein | SAMEA3472147_01498 | Not Available | Positive | 1605319 - 1605597 | 10000.6 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc | SAMEA3472147_01499 | Not Available | Negative | 1605718 - 1607724 | 74469.2 |
| 3-oxoacyl-acp synthase | SAMEA3472147_01500 | Not Available | Positive | 1607883 - 1609103 | 42615.8 |
| major facilitator superfamily protein | SAMEA3472147_01501 | Not Available | Positive | 1609378 - 1610556 | 40466.7 |
| cell division protein | SAMEA3472147_01502 | Not Available | Negative | 1610553 - 1611548 | 36656.5 |
| erythronate-4-phosphate dehydrogenase | SAMEA3472147_01503 | Not Available | Positive | 1611647 - 1612783 | 41341.0 |
| putative semialdehyde dehydrogenase | SAMEA3472147_01504 | Not Available | Positive | 1612849 - 1613862 | 36380.2 |
| trna pseudouridine synthase a | SAMEA3472147_01505 | Not Available | Positive | 1613862 - 1614674 | 30414.2 |
| inner membrane protein | SAMEA3472147_01506 | Not Available | Positive | 1614757 - 1615416 | 24511.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





