Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein papd | SAMEA3472147_01487 | Not Available | Positive | 1597112 - 1597864 | 27859.8 |
| putative fimbrial-like adhesin protein | SAMEA3472147_01488 | Not Available | Positive | 1597880 - 1598383 | 17910.3 |
| fimbrial-like adhesin protein | SAMEA3472147_01489 | Not Available | Positive | 1598380 - 1598856 | 17054.3 |
| putative exported fimbrial-like adhesin protein | SAMEA3472147_01490 | Not Available | Positive | 1598853 - 1599377 | 18794.6 |
| putative fimbrial adhesin yfco precursor | SAMEA3472147_01491 | Not Available | Positive | 1599378 - 1600217 | 30420.9 |
| smr protein/muts2 | SAMEA3472147_01492 | Not Available | Negative | 1600331 - 1600882 | 20972.5 |
| putative methylase | SAMEA3472147_01493 | Not Available | Positive | 1601048 - 1601980 | 35033.7 |
| chorismate synthase | SAMEA3472147_01494 | Not Available | Positive | 1602015 - 1603100 | 39137.8 |
| penicillin-insensitive murein endopeptidase | SAMEA3472147_01495 | Not Available | Positive | 1603104 - 1603928 | 30166.4 |
| inner membrane protein | SAMEA3472147_01496 | Not Available | Positive | 1603928 - 1604737 | 28687.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





