Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion protein | SAMEA3472147_01477 | Not Available | Negative | 1583578 - 1584225 | 24379.2 |
| putative type vi secretion protein | SAMEA3472147_01478 | Not Available | Negative | 1584222 - 1585112 | 32485.9 |
| uncharacterised protein | SAMEA3472147_01479 | Not Available | Negative | 1585492 - 1586466 | 36404.0 |
| long-chain fatty acid transport protein | SAMEA3472147_01480 | Not Available | Negative | 1586841 - 1588181 | 48642.2 |
| protein yfcz | SAMEA3472147_01481 | Not Available | Positive | 1588553 - 1588837 | 10304.1 |
| fatty acid oxidation comple beta subunit (3 -ketoacyl-coa thiolase) | SAMEA3472147_01482 | Not Available | Positive | 1589019 - 1590329 | 46561.4 |
| fatty acid oxidation complex alpha subunit | SAMEA3472147_01483 | Not Available | Positive | 1590329 - 1592473 | 76857.6 |
| phosphohistidine phosphatase | SAMEA3472147_01484 | Not Available | Positive | 1592676 - 1593161 | 17208.8 |
| fimbrial protein | SAMEA3472147_01485 | Not Available | Positive | 1593805 - 1594368 | 19661.8 |
| fimbrial usher | SAMEA3472147_01486 | Not Available | Positive | 1594450 - 1597089 | 96966.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





