Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion protein | SAMEA3472147_01467 | Not Available | Negative | 1572112 - 1572648 | 19136.1 |
| putative type vi secretion protein | SAMEA3472147_01468 | Not Available | Negative | 1572629 - 1573723 | 40887.4 |
| putative type vi secretion protein | SAMEA3472147_01469 | Not Available | Negative | 1573687 - 1575450 | 67219.4 |
| uncharacterised protein | SAMEA3472147_01470 | Not Available | Negative | 1575514 - 1575987 | 18007.2 |
| putative type vi secretion protein | SAMEA3472147_01471 | Not Available | Negative | 1576057 - 1577655 | 58741.7 |
| putative type vi secretion protein | SAMEA3472147_01472 | Not Available | Negative | 1577655 - 1581032 | 124356.0 |
| putative type vi secretion protein | SAMEA3472147_01473 | Not Available | Negative | 1581061 - 1582215 | 42821.2 |
| putative type vi secretion protein | SAMEA3472147_01474 | Not Available | Negative | 1582219 - 1582485 | 8890.77 |
| uncharacterised protein | SAMEA3472147_01475 | Not Available | Negative | 1582576 - 1582989 | 15901.1 |
| uncharacterised protein | SAMEA3472147_01476 | Not Available | Positive | 1583276 - 1583563 | 10780.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





