Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMEA3472147_01427 | Not Available | Negative | 1532152 - 1533429 | 45849.2 |
| mannitol-specific cryptic pts system eiicb component | SAMEA3472147_01428 | Not Available | Negative | 1533444 - 1534832 | 48974.1 |
| mannitol-specific cryptic pts system iiia component | SAMEA3472147_01429 | Not Available | Negative | 1534860 - 1535303 | 16047.1 |
| putative membrane protease | SAMEA3472147_01430 | Not Available | Positive | 1535681 - 1536589 | 33052.9 |
| transketolase | SAMEA3472147_01431 | Not Available | Negative | 1536808 - 1538799 | 72125.6 |
| peptidase | SAMEA3472147_01432 | Not Available | Positive | 1539077 - 1539835 | 26844.9 |
| agmatinase | SAMEA3472147_01433 | Not Available | Negative | 1540041 - 1540961 | 33558.9 |
| lipoprotein | SAMEA3472147_01434 | Not Available | Negative | 1541097 - 1541828 | 26329.7 |
| arginine decarboxylase | SAMEA3472147_01435 | Not Available | Negative | 1541974 - 1543950 | 73890.6 |
| inner membrane protein | SAMEA3472147_01436 | Not Available | Negative | 1544438 - 1544689 | 9519.81 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





