Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein h | SAMEA3472147_01395 | Not Available | Negative | 1502145 - 1502534 | 13839.9 |
| aminomethyltransferase (glycine cleavage system protein) | SAMEA3472147_01396 | Not Available | Negative | 1502558 - 1503652 | 40209.1 |
| putative monooxygenase | SAMEA3472147_01397 | Not Available | Negative | 1504099 - 1505301 | 44187.1 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMEA3472147_01398 | Not Available | Negative | 1505324 - 1506502 | 42385.0 |
| proline aminopeptidase ii | SAMEA3472147_01399 | Not Available | Negative | 1506499 - 1507824 | 49839.3 |
| yeca family protein | SAMEA3472147_01400 | Not Available | Negative | 1507850 - 1508428 | 21230.8 |
| z-ring-associated protein | SAMEA3472147_01401 | Not Available | Positive | 1508596 - 1508925 | 12594.9 |
| 5,10-methenyltetrahydrofolate synthetase | SAMEA3472147_01403 | Not Available | Positive | 1509171 - 1509773 | 23304.4 |
| d-3-phosphoglycerate dehydrogenase | SAMEA3472147_01405 | Not Available | Negative | 1510162 - 1511394 | 44178.4 |
| ribose-5-phosphate isomerase a | SAMEA3472147_01406 | Not Available | Negative | 1511650 - 1512309 | 22861.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





