Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein | SAMEA3472147_01385 | Not Available | Negative | 1492120 - 1492830 | 25609.1 |
| tyrosine recombinase | SAMEA3472147_01386 | Not Available | Negative | 1492855 - 1493751 | 34248.4 |
| flavodoxin ii | SAMEA3472147_01387 | Not Available | Positive | 1493863 - 1494384 | 19701.2 |
| protein | SAMEA3472147_01388 | Not Available | Negative | 1494424 - 1494831 | 16065.0 |
| tpr repeat protein | SAMEA3472147_01389 | Not Available | Negative | 1494812 - 1495078 | 10547.7 |
| pp_01327 | SAMEA3472147_01390 | Not Available | Positive | 1495321 - 1496301 | Not Available |
| hemolysin (membrane protein) | SAMEA3472147_01391 | Not Available | Negative | 1496378 - 1497037 | 23848.2 |
| putative cytoplasmic protein | SAMEA3472147_01392 | Not Available | Negative | 1497201 - 1497512 | 11906.0 |
| 6-phospho-beta-glucosidase | SAMEA3472147_01393 | Not Available | Positive | 1497557 - 1498990 | 55104.4 |
| glycine dehydrogenase | SAMEA3472147_01394 | Not Available | Negative | 1499154 - 1502027 | 104309.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





