Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atpase/permease | SAMEA3472147_01344 | Not Available | Negative | 1430414 - 1432057 | 61542.4 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3472147_01345 | Not Available | Negative | 1432133 - 1432783 | 24064.8 |
| regulatory protein of adaptative response | SAMEA3472147_01346 | Not Available | Negative | 1432783 - 1433847 | 39268.8 |
| thiamine biosynthesis lipoprotein | SAMEA3472147_01347 | Not Available | Negative | 1433921 - 1434976 | 38594.0 |
| outer membrane porin protein c | SAMEA3472147_01348 | Not Available | Negative | 1435088 - 1436215 | 41262.4 |
| two-component system sensor kinase | SAMEA3472147_01350 | Not Available | Positive | 1436954 - 1439626 | 100353.0 |
| transcriptional regulator rcsb | SAMEA3472147_01351 | Not Available | Positive | 1439643 - 1440293 | 23672.0 |
| two-component system sensor kinase | SAMEA3472147_01352 | Not Available | Negative | 1440493 - 1443342 | 106527.0 |
| duf2135 family protein, function uncharacterised | SAMEA3472147_01353 | Not Available | Negative | 1443617 - 1444393 | 28291.2 |
| protein | SAMEA3472147_01354 | Not Available | Negative | 1444398 - 1446047 | 61455.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





