Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:arg,anti_codon:tcg; | Not Available | Not Available | Positive | 4048901 - 4048977 | Not Available |
| Trna,type:arg,anti_codon:tct; | Not Available | Not Available | Positive | 4048991 - 4049067 | Not Available |
| Trna,type:gly,anti_codon:tcc; | Not Available | Not Available | Positive | 4049069 - 4049143 | Not Available |
| Is1 transposase b | SAMEA3472147_03890 | Not Available | Positive | 4049594 - 4049962 | 15027.3 |
| Attl | Not Available | Not Available | Positive | 4497781 - 4497793 | Not Available |
| Integrase | SAMEA3472147_04354 | Not Available | Positive | 4503663 - 4504880 | 46543.5 |
| uncharacterised protein | SAMEA3472147_04355 | Not Available | Negative | 4505939 - 4506118 | 6600.93 |
| putative prophage protein | SAMEA3472147_04356 | Not Available | Positive | 4506318 - 4506521 | 7619.05 |
| uncharacterised protein | SAMEA3472147_04357 | Not Available | Positive | 4506514 - 4506834 | 11775.9 |
| putative prophage protein | SAMEA3472147_04358 | Not Available | Positive | 4506841 - 4507140 | 11598.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





