Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | SAMEA3472147_01294 | Not Available | Negative | 1379406 - 1380347 | 33857.2 |
| dna-binding transcriptional activator yeil | SAMEA3472147_01295 | Not Available | Positive | 1380477 - 1381175 | 26892.7 |
| putative nucleoside transporter | SAMEA3472147_01296 | Not Available | Negative | 1381246 - 1382496 | 43522.4 |
| indigoidine synthase a like protein | SAMEA3472147_01297 | Not Available | Negative | 1382760 - 1383524 | 26896.7 |
| putative pyrimidine kinase | SAMEA3472147_01298 | Not Available | Negative | 1383512 - 1384453 | 33644.9 |
| pts system fructose-specific transporter subunit iibc | SAMEA3472147_01299 | Not Available | Negative | 1384877 - 1386568 | 57478.6 |
| 1-phosphofructokinase | SAMEA3472147_01300 | Not Available | Negative | 1386585 - 1387523 | 33757.6 |
| multiphosphoryl transfer protein | SAMEA3472147_01301 | Not Available | Negative | 1387523 - 1388653 | 39698.2 |
| sugar efflux transporter b | SAMEA3472147_01302 | Not Available | Positive | 1389021 - 1390202 | 42720.6 |
| upf0153 cysteine cluster protein, function uncharacterised | SAMEA3472147_01303 | Not Available | Negative | 1390199 - 1390453 | 8954.96 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





