Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein yeib | SAMEA3472147_01284 | Not Available | Negative | 1367024 - 1368181 | 43368.1 |
| gtp cyclohydrolase i fole | SAMEA3472147_01285 | Not Available | Negative | 1368198 - 1368866 | 24832.1 |
| putative esterase | SAMEA3472147_01286 | Not Available | Positive | 1369124 - 1369960 | 31288.9 |
| colicin i tonb-dependent receptor | SAMEA3472147_01287 | Not Available | Negative | 1369992 - 1371983 | 73971.6 |
| lysine transporter | SAMEA3472147_01288 | Not Available | Negative | 1372275 - 1373744 | 53579.0 |
| lysr family transcriptional regulator | SAMEA3472147_01289 | Not Available | Negative | 1373949 - 1374830 | 32725.7 |
| inner membrane protein | SAMEA3472147_01290 | Not Available | Positive | 1374929 - 1375978 | 36884.3 |
| endonuclease iv | SAMEA3472147_01291 | Not Available | Positive | 1376052 - 1376909 | 31493.3 |
| putative pyrimidine kinase | SAMEA3472147_01292 | Not Available | Positive | 1376912 - 1378000 | 39678.5 |
| putative nucleoside transporter | SAMEA3472147_01293 | Not Available | Negative | 1378056 - 1379306 | 43400.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





