Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein lrgb-like family | SAMEA3472147_01274 | Not Available | Positive | 1356281 - 1356976 | 24503.1 |
| cytidine deaminase | SAMEA3472147_01275 | Not Available | Positive | 1357106 - 1357990 | 31614.7 |
| vancomycin sensitivity sana protein | SAMEA3472147_01276 | Not Available | Positive | 1358140 - 1358859 | 27288.5 |
| uncharacterised protein | SAMEA3472147_01277 | Not Available | Positive | 1358862 - 1359074 | 7995.68 |
| putative oxidoreductase | SAMEA3472147_01278 | Not Available | Positive | 1359419 - 1360657 | 44324.2 |
| dihydropyrimidine dehydrogenase | SAMEA3472147_01279 | Not Available | Positive | 1360651 - 1361886 | 45071.4 |
| galactoside abc transporter, permease protein | SAMEA3472147_01280 | Not Available | Negative | 1361957 - 1362967 | 35552.4 |
| galactose/methyl galactoside abc transporter, atp-binding protein | SAMEA3472147_01281 | Not Available | Negative | 1362983 - 1364503 | 56404.8 |
| d-galactose abc transporter, substrate-binding protein | SAMEA3472147_01282 | Not Available | Negative | 1364564 - 1365562 | 35730.5 |
| dna-binding transcriptional regulator gals | SAMEA3472147_01283 | Not Available | Negative | 1365842 - 1366882 | 37404.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





