Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SAMEA3472147_01264 | Not Available | Negative | 1343765 - 1344682 | 32625.0 |
| periplasmic beta-glucosidase | SAMEA3472147_01265 | Not Available | Negative | 1344934 - 1347201 | 82433.4 |
| d-lactate dehydrogenase | SAMEA3472147_01266 | Not Available | Positive | 1347427 - 1349142 | 64680.0 |
| penicillin-binding protein 7 | SAMEA3472147_01267 | Not Available | Negative | 1349181 - 1350113 | 33889.4 |
| inner membrane protein | SAMEA3472147_01268 | Not Available | Negative | 1350287 - 1350874 | 21692.0 |
| deda family membrane protein | SAMEA3472147_01269 | Not Available | Positive | 1351044 - 1351622 | 21422.9 |
| putative short-chain dehydrogenase | SAMEA3472147_01270 | Not Available | Negative | 1351752 - 1352513 | 26953.4 |
| multidrug resistance outer membrane protein mdtq | SAMEA3472147_01271 | Not Available | Negative | 1352566 - 1354092 | 55692.3 |
| pp_01211 | SAMEA3472147_01272 | Not Available | Negative | 1354697 - 1355647 | Not Available |
| putative effector of murein hydrolase lrga | SAMEA3472147_01273 | Not Available | Positive | 1355886 - 1356284 | 14593.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





