Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc finger swim domain-containing protein | SAMEA3472147_01254 | Not Available | Positive | 1334301 - 1336301 | 73684.3 |
| lipoprotein yehr | SAMEA3472147_01255 | Not Available | Positive | 1336426 - 1336887 | 16678.1 |
| conserved protein, duf1456 family | SAMEA3472147_01256 | Not Available | Negative | 1336927 - 1337397 | 18016.0 |
| two-component response-regulatory protein yeht | SAMEA3472147_01257 | Not Available | Negative | 1337444 - 1338163 | 27401.4 |
| sensor histidine kinase | SAMEA3472147_01258 | Not Available | Negative | 1338160 - 1339845 | 62096.3 |
| merr family transcriptional regulator | SAMEA3472147_01259 | Not Available | Positive | 1340067 - 1340798 | 28082.8 |
| putative inner membrane protein | SAMEA3472147_01260 | Not Available | Positive | 1340858 - 1340965 | 3642.85 |
| abc transporter permease | SAMEA3472147_01261 | Not Available | Negative | 1340946 - 1341677 | 25512.1 |
| abc transporter atp-binding protein | SAMEA3472147_01262 | Not Available | Negative | 1341682 - 1342608 | 34440.6 |
| abc transporter permease | SAMEA3472147_01263 | Not Available | Negative | 1342601 - 1343758 | 41208.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





