Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactitol-specific pts system eiic component | SAMEA3472147_01232 | Not Available | Negative | 1315716 - 1317071 | 48426.2 |
| galactitol-specific pts system eiib component | SAMEA3472147_01233 | Not Available | Negative | 1317075 - 1317359 | 10167.6 |
| galactitol-specific pts system eiia component | SAMEA3472147_01234 | Not Available | Negative | 1317390 - 1317842 | 16908.4 |
| putative tagatose 6-phosphate kinase | SAMEA3472147_01235 | Not Available | Negative | 1317852 - 1319114 | 47011.3 |
| tagatose-bisphosphate aldolase | SAMEA3472147_01236 | Not Available | Negative | 1319143 - 1319997 | 30869.8 |
| fructose-bisphosphate aldolase | SAMEA3472147_01237 | Not Available | Negative | 1320297 - 1321349 | 38111.4 |
| major facilitator superfamily protein | SAMEA3472147_01238 | Not Available | Positive | 1321606 - 1322883 | 47379.8 |
| putative adp-ribosylglycohydrolase | SAMEA3472147_01239 | Not Available | Positive | 1322880 - 1323884 | 35633.5 |
| putative carbohydrate/pyrimidine kinase | SAMEA3472147_01240 | Not Available | Positive | 1323881 - 1324846 | 34378.5 |
| gntr family transcriptional regulator | SAMEA3472147_01241 | Not Available | Negative | 1324820 - 1325566 | 28278.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





