Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor kinase | SAMEA3472147_01221 | Not Available | Positive | 1306813 - 1308216 | 52047.4 |
| two-component response regulator | SAMEA3472147_01222 | Not Available | Positive | 1308213 - 1308935 | 27657.5 |
| protein | SAMEA3472147_01223 | Not Available | Positive | 1309126 - 1309458 | 11994.9 |
| putative addiction module antidote protein | SAMEA3472147_01224 | Not Available | Positive | 1309702 - 1309953 | 9554.46 |
| plasmid stabilisation system protein | SAMEA3472147_01225 | Not Available | Positive | 1309955 - 1310251 | 11540.8 |
| putative protease | SAMEA3472147_01226 | Not Available | Positive | 1310354 - 1311715 | 51182.1 |
| protein | SAMEA3472147_01228 | Not Available | Negative | 1312045 - 1312377 | 11837.2 |
| lipid kinase | SAMEA3472147_01229 | Not Available | Positive | 1312768 - 1313667 | 31931.6 |
| galactitol utilization operon repressor | SAMEA3472147_01230 | Not Available | Negative | 1313749 - 1314528 | 27946.9 |
| galactitol-1-phosphate 5-dehydrogenase | SAMEA3472147_01231 | Not Available | Negative | 1314628 - 1315668 | 37362.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





