Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | SAMEA3472147_01175 | Not Available | Negative | 1253128 - 1254006 | 32497.3 |
| dtdp-4-dehydrorhamnose reductase | SAMEA3472147_01176 | Not Available | Negative | 1254064 - 1254963 | 32509.6 |
| dtdp-d-glucose 4,6-dehydratase rmlb | SAMEA3472147_01177 | Not Available | Negative | 1254963 - 1256048 | 40664.4 |
| utp--glucose-1-phosphate uridylyltransferase subunit galf | SAMEA3472147_01179 | Not Available | Negative | 1256421 - 1257314 | 32800.2 |
| colanic acid biosynthesis protein | SAMEA3472147_01180 | Not Available | Negative | 1257489 - 1258883 | 51312.8 |
| putative colanic acid biosynthesis glycosyltransferase | SAMEA3472147_01181 | Not Available | Negative | 1258894 - 1260114 | 45315.3 |
| colanic acid biosynthesis protein | SAMEA3472147_01182 | Not Available | Negative | 1260111 - 1261391 | 47373.5 |
| putative flippase (putative export protein) | SAMEA3472147_01183 | Not Available | Negative | 1262143 - 1263621 | 53665.9 |
| putative colanic biosynthesis udp-glucose lipid carrier transferase | SAMEA3472147_01184 | Not Available | Negative | 1263623 - 1265017 | 52397.5 |
| phosphomannomutase cpsg | SAMEA3472147_01185 | Not Available | Negative | 1265072 - 1266442 | 50320.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





