Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase group 2 family protein | SAMEA3472147_01165 | Not Available | Negative | 1242694 - 1243530 | 32636.4 |
| uncharacterised protein | SAMEA3472147_01166 | Not Available | Negative | 1243552 - 1244631 | 41390.4 |
| udp-n-acetylglucosamine 2-epimerase | SAMEA3472147_01167 | Not Available | Negative | 1244684 - 1245769 | 39972.5 |
| uncharacterised protein | SAMEA3472147_01168 | Not Available | Negative | 1245846 - 1247177 | 50354.5 |
| capsular polysacharride biosynthesis protein | SAMEA3472147_01169 | Not Available | Negative | 1247211 - 1248470 | 47571.9 |
| aminotransferase | SAMEA3472147_01170 | Not Available | Negative | 1248467 - 1249567 | 40482.5 |
| galactoside o-acetyltransferase | SAMEA3472147_01171 | Not Available | Negative | 1249570 - 1250148 | 20932.0 |
| putative dehydrogenase from bacteriophage origin | SAMEA3472147_01172 | Not Available | Negative | 1250175 - 1251233 | 39207.8 |
| vi polysaccharide biosynthesis protein vipa/tvib | SAMEA3472147_01173 | Not Available | Negative | 1251235 - 1252539 | 48368.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase rfbc | SAMEA3472147_01174 | Not Available | Negative | 1252584 - 1253123 | 20697.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





