Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate aminotransferase | SAMEA3472147_01155 | Not Available | Positive | 1232507 - 1233577 | 39492.5 |
| imidazole glycerol-phosphate dehydratase/histidinol phosphatase | SAMEA3472147_01156 | Not Available | Positive | 1233577 - 1234644 | 40265.3 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472147_01157 | Not Available | Positive | 1234644 - 1235234 | 21654.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMEA3472147_01158 | Not Available | Positive | 1235234 - 1235971 | 26016.2 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472147_01159 | Not Available | Positive | 1235953 - 1236729 | 28456.1 |
| histidine biosynthesis bifunctional protein | SAMEA3472147_01160 | Not Available | Positive | 1236723 - 1237334 | 22872.2 |
| regulator of length of o-antigen component of lipopolysaccharide chains | SAMEA3472147_01161 | Not Available | Negative | 1237517 - 1238494 | 36220.6 |
| udp-glucose 6-dehydrogenase | SAMEA3472147_01162 | Not Available | Negative | 1238640 - 1239806 | 43640.4 |
| 6-phosphogluconate dehydrogenase | SAMEA3472147_01163 | Not Available | Negative | 1240055 - 1241461 | 51453.1 |
| putative glycosyl transferase | SAMEA3472147_01164 | Not Available | Negative | 1241601 - 1242656 | 39950.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





