Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 1212800 - 1212875 | Not Available |
| lysr family transcriptional regulator | SAMEA3472147_01134 | Not Available | Negative | 1212913 - 1213863 | 35856.0 |
| nitrogen assimilation regulatory protein nac | SAMEA3472147_01135 | Not Available | Negative | 1213965 - 1214882 | 32821.0 |
| Trna-asn | Not Available | Not Available | Positive | 1215208 - 1215283 | Not Available |
| erfk/ybis/ycfs/ynhg family protein | SAMEA3472147_01137 | Not Available | Negative | 1215339 - 1216274 | 34500.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3472147_01138 | Not Available | Negative | 1216336 - 1217415 | 36917.2 |
| cobalamin synthase | SAMEA3472147_01139 | Not Available | Negative | 1217427 - 1218170 | 26397.4 |
| bifunctional adenosylcobalamin biosynthesis protein | SAMEA3472147_01140 | Not Available | Negative | 1218167 - 1218709 | 19970.9 |
| putative alpha helix protein | SAMEA3472147_01141 | Not Available | Negative | 1219581 - 1219910 | 12778.5 |
| inner membrane protein | SAMEA3472147_01142 | Not Available | Negative | 1220082 - 1221140 | 39957.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





