Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-succinyltransferase | SAMEA3472147_01091 | Not Available | Positive | 1163424 - 1164353 | 35745.2 |
| malate synthase | SAMEA3472147_01092 | Not Available | Positive | 1164622 - 1166223 | 60355.1 |
| isocitrate lyase | SAMEA3472147_01093 | Not Available | Positive | 1166253 - 1167557 | 47524.1 |
| isocitrate dehydrogenase kinase/phosphatase | SAMEA3472147_01094 | Not Available | Positive | 1167741 - 1169477 | 67755.5 |
| putative type iii effector protein (ankyrin repeat protein a) | SAMEA3472147_01095 | Not Available | Negative | 1169446 - 1171632 | 82593.8 |
| iclr family transcriptional regulator | SAMEA3472147_01096 | Not Available | Negative | 1171949 - 1172773 | 29741.1 |
| b12-dependent methionine synthase | SAMEA3472147_01097 | Not Available | Positive | 1172973 - 1176656 | 136061.0 |
| putative transporter | SAMEA3472147_01098 | Not Available | Positive | 1176876 - 1178507 | 59470.7 |
| peptidase e | SAMEA3472147_01099 | Not Available | Negative | 1178598 - 1179287 | 24571.7 |
| putative l-sorbose 1-phosphate reductase | SAMEA3472147_01100 | Not Available | Negative | 1179670 - 1180899 | 44731.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





