Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | SAMEA3472147_01070 | Not Available | Positive | 1146908 - 1147312 | 14549.6 |
| putative phosphoribulokinase | SAMEA3472147_01071 | Not Available | Negative | 1147367 - 1148236 | 32345.9 |
| putative enolase | SAMEA3472147_01072 | Not Available | Negative | 1148290 - 1148508 | 8470.04 |
| putative hydrolase | SAMEA3472147_01073 | Not Available | Negative | 1148502 - 1149524 | 38485.3 |
| abc transporter atp-binding protein | SAMEA3472147_01074 | Not Available | Negative | 1149524 - 1151437 | 71775.5 |
| glutathione-regulated potassium-efflux system ancillary protein | SAMEA3472147_01075 | Not Available | Positive | 1151568 - 1152119 | 20827.9 |
| glutathione-regulated potassium-efflux system protein (k(+)/h(+)antiporter) | SAMEA3472147_01076 | Not Available | Positive | 1152119 - 1153924 | 66443.4 |
| protein | SAMEA3472147_01077 | Not Available | Positive | 1153934 - 1154134 | 7599.17 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMEA3472147_01078 | Not Available | Positive | 1154229 - 1154819 | 20854.1 |
| protein slyx | SAMEA3472147_01079 | Not Available | Negative | 1154868 - 1155086 | 8214.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





