Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein | SAMEA3472147_01030 | Not Available | Negative | 1107301 - 1108179 | 32506.3 |
| heat shock protein | SAMEA3472147_01031 | Not Available | Negative | 1108204 - 1108605 | 15496.7 |
| putative hydrolase | SAMEA3472147_01032 | Not Available | Negative | 1108616 - 1109284 | 25439.2 |
| membrane protein igaa | SAMEA3472147_01033 | Not Available | Negative | 1109349 - 1111484 | 79463.4 |
| adp compounds hydrolase | SAMEA3472147_01034 | Not Available | Positive | 1111804 - 1112364 | 21154.4 |
| penicillin-binding protein 1a | SAMEA3472147_01035 | Not Available | Negative | 1112529 - 1115081 | 93612.4 |
| pilus assembly protein | SAMEA3472147_01036 | Not Available | Positive | 1115201 - 1115980 | 29122.0 |
| putative fimbrial assembly protein | SAMEA3472147_01037 | Not Available | Positive | 1115980 - 1116519 | 20850.3 |
| protein involved in utilization of dna as a carbon source | SAMEA3472147_01038 | Not Available | Positive | 1116503 - 1116943 | 16815.1 |
| protein involved in utilization of dna as a carbon source | SAMEA3472147_01039 | Not Available | Positive | 1116933 - 1117337 | 15071.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





