Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA3472147_01020 | Not Available | Negative | 1093908 - 1094786 | 33260.3 |
| dna-binding transcriptional regulator | SAMEA3472147_01021 | Not Available | Negative | 1094989 - 1095225 | 8660.66 |
| ferrous iron transport protein b | SAMEA3472147_01022 | Not Available | Negative | 1095225 - 1097546 | 84448.7 |
| ferrous iron transport protein a | SAMEA3472147_01023 | Not Available | Negative | 1097563 - 1097790 | 8371.31 |
| putative transcription accessory protein | SAMEA3472147_01024 | Not Available | Negative | 1098247 - 1100568 | 85110.7 |
| transcription elongation factor greb | SAMEA3472147_01025 | Not Available | Negative | 1100665 - 1101141 | 18546.1 |
| transcriptional regulatory protein ompr | SAMEA3472147_01026 | Not Available | Positive | 1101369 - 1102088 | 27355.3 |
| osmolarity sensor protein envz | SAMEA3472147_01027 | Not Available | Positive | 1102085 - 1103437 | 50337.1 |
| phosphoenolpyruvate carboxykinase | SAMEA3472147_01028 | Not Available | Negative | 1103513 - 1105135 | 59618.6 |
| inner membrane protein | SAMEA3472147_01029 | Not Available | Positive | 1105514 - 1107238 | 64735.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





