Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 3'-terminal-phosphate cyclase | SAMEA3472147_01010 | Not Available | Positive | 1080331 - 1081359 | 36317.1 |
| gnat family acetyltransferase | SAMEA3472147_01011 | Not Available | Negative | 1081409 - 1081894 | 17665.6 |
| uncharacterized protein conserved in bacteria | SAMEA3472147_01012 | Not Available | Negative | 1081885 - 1082163 | 10421.5 |
| regulatory protein | SAMEA3472147_01013 | Not Available | Negative | 1082230 - 1084935 | 103022.0 |
| maltodextrin phosphorylase | SAMEA3472147_01014 | Not Available | Positive | 1085547 - 1087940 | 90539.4 |
| 4-alpha-glucanotransferase | SAMEA3472147_01015 | Not Available | Positive | 1087950 - 1090034 | 78514.7 |
| gluconate transporter, high-affinity gnt i system | SAMEA3472147_01016 | Not Available | Negative | 1090079 - 1091395 | 45969.6 |
| putative thioredoxin-like protein | SAMEA3472147_01017 | Not Available | Negative | 1091756 - 1092331 | 20998.9 |
| gluconate periplasmic binding protein | SAMEA3472147_01018 | Not Available | Negative | 1092390 - 1093073 | 25795.9 |
| carboxylesterase (biotin synthesis protein bioh) | SAMEA3472147_01019 | Not Available | Positive | 1093111 - 1093881 | 28590.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





