Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter, atp-binding protein | SAMEA3472147_00979 | Not Available | Positive | 1045445 - 1046515 | 39465.2 |
| glycerophosphoryl diester phosphodiesterase | SAMEA3472147_00980 | Not Available | Positive | 1046512 - 1047255 | 27334.0 |
| conserved protein, duf2756 family | SAMEA3472147_00981 | Not Available | Negative | 1047242 - 1047682 | 16571.9 |
| gamma-glutamyltranspeptidase | SAMEA3472147_00982 | Not Available | Positive | 1047802 - 1049547 | 62005.7 |
| protein | SAMEA3472147_00983 | Not Available | Negative | 1049585 - 1049869 | 10583.4 |
| uncharacterised protein | SAMEA3472147_00984 | Not Available | Negative | 1050319 - 1050813 | 19018.5 |
| type vi secretion system effector, hcp1 family | SAMEA3472147_00985 | Not Available | Negative | 1050810 - 1051988 | 44478.3 |
| n-acetyltransferase gcn5 | SAMEA3472147_00986 | Not Available | Negative | 1052225 - 1052713 | 18780.6 |
| putative oxidoreductase | SAMEA3472147_00988 | Not Available | Positive | 1053048 - 1054085 | 38767.1 |
| pirin-related protein | SAMEA3472147_00989 | Not Available | Positive | 1054208 - 1054903 | 26292.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





