Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fatty acid degradation enzyme | SAMEA3472147_00949 | Not Available | Negative | 1017607 - 1018524 | 35013.5 |
| beta-ketoacyl synthase domain-containing protein | SAMEA3472147_00950 | Not Available | Negative | 1018517 - 1019014 | 18262.9 |
| putative methyltransferase | SAMEA3472147_00951 | Not Available | Negative | 1019055 - 1020113 | 39307.8 |
| lipoprotein | SAMEA3472147_00952 | Not Available | Negative | 1020182 - 1020559 | 13798.4 |
| inner membrane protein | SAMEA3472147_00953 | Not Available | Negative | 1020951 - 1022000 | 38524.8 |
| major facilitator superfamily protein | SAMEA3472147_00954 | Not Available | Positive | 1022099 - 1023349 | 43454.0 |
| periplasmic protein dcrb | SAMEA3472147_00955 | Not Available | Negative | 1023353 - 1023910 | 19788.7 |
| inner membrane protein | SAMEA3472147_00956 | Not Available | Negative | 1023983 - 1024648 | 25304.3 |
| sulfurtransferase (trna 2-thiouridine synthesizin protein a) | SAMEA3472147_00957 | Not Available | Positive | 1024869 - 1025114 | 9095.09 |
| zinc/cadmium/mercury/lead-transporting atpase | SAMEA3472147_00958 | Not Available | Negative | 1025216 - 1027414 | 76737.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





