Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative short chain dehydrogenase | SAMEA3472147_00939 | Not Available | Negative | 1009342 - 1010073 | 25671.1 |
| putative dehydratase | SAMEA3472147_00940 | Not Available | Negative | 1010073 - 1010537 | 16591.8 |
| 3-oxoacyl-acp synthase | SAMEA3472147_00941 | Not Available | Negative | 1010534 - 1011703 | 41111.3 |
| putative lipoprotein | SAMEA3472147_00942 | Not Available | Negative | 1011705 - 1011917 | 8173.85 |
| putative lipoprotein | SAMEA3472147_00943 | Not Available | Negative | 1011917 - 1012288 | 13410.3 |
| putative transporter | SAMEA3472147_00944 | Not Available | Negative | 1012285 - 1014603 | 84221.3 |
| outer membrane lipoprotein carrier protein lola family | SAMEA3472147_00945 | Not Available | Negative | 1014572 - 1015177 | 23195.9 |
| putative thioesterase | SAMEA3472147_00946 | Not Available | Negative | 1015174 - 1015596 | 16620.8 |
| putative glycosyl transferase | SAMEA3472147_00947 | Not Available | Negative | 1015600 - 1017276 | 62796.3 |
| putative fatty acid degradation enzyme | SAMEA3472147_00948 | Not Available | Negative | 1017267 - 1017620 | 13688.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





