Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase system enzyme subunit | SAMEA3472147_00929 | Not Available | Negative | 1000651 - 1001124 | 17486.4 |
| gntr family transcriptional regulator | SAMEA3472147_00930 | Not Available | Negative | 1001149 - 1001895 | 28393.2 |
| nickel responsive regulator | SAMEA3472147_00931 | Not Available | Negative | 1002094 - 1002495 | 15094.7 |
| nickel abc transporter, atp-binding protein | SAMEA3472147_00932 | Not Available | Negative | 1002501 - 1003307 | 29718.4 |
| nickel abc transporter, atp-binding protein | SAMEA3472147_00933 | Not Available | Negative | 1003304 - 1004068 | 26762.0 |
| nickel abc transporter, permease protein | SAMEA3472147_00934 | Not Available | Negative | 1004068 - 1004901 | 30362.9 |
| nickel abc-transporter, permease protein | SAMEA3472147_00935 | Not Available | Negative | 1004898 - 1005842 | 35250.3 |
| nickel abc transporter, substrate-binding protein | SAMEA3472147_00936 | Not Available | Negative | 1005842 - 1007416 | 58749.2 |
| 4'-phosphopantetheinyl transferase | SAMEA3472147_00937 | Not Available | Negative | 1007527 - 1008114 | 21738.9 |
| putative beta-ketoacyl synthase | SAMEA3472147_00938 | Not Available | Negative | 1008116 - 1009345 | 44132.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





