Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 916517 - 916601 | Not Available |
| respiratory nitrate reductase 1 subunit gamma | SAMEA3472147_00847 | Not Available | Negative | 917141 - 917818 | 25484.9 |
| respiratory nitrate reductase 1 subunit delta | SAMEA3472147_00848 | Not Available | Negative | 917818 - 918528 | 26450.3 |
| respiratory nitrate reductase 1 subunit beta | SAMEA3472147_00849 | Not Available | Negative | 918525 - 920063 | 58111.6 |
| respiratory nitrate reductase 1 subunit alpha | SAMEA3472147_00850 | Not Available | Negative | 920060 - 923803 | 140465.0 |
| nitrite extrusion protein 1 | SAMEA3472147_00851 | Not Available | Negative | 924196 - 925587 | 49696.3 |
| uncharacterised protein | SAMEA3472147_00852 | Not Available | Negative | 925682 - 925900 | 8585.29 |
| nitrate/nitrite two-component sensor kinase | SAMEA3472147_00853 | Not Available | Positive | 925926 - 927722 | 67077.9 |
| transcriptional regulator narl | SAMEA3472147_00854 | Not Available | Positive | 927715 - 928365 | 23928.3 |
| invasin | SAMEA3472147_00855 | Not Available | Negative | 928366 - 929796 | 53582.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





