Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 abc transporter, permease protein | SAMEA3472147_02701 | Not Available | Positive | 2814676 - 2815656 | 34937.5 |
| vitamin b12 transport periplasmic protein (putative glutathione peroxidase) | SAMEA3472147_02702 | Not Available | Positive | 2815719 - 2816270 | 20395.5 |
| Abc transporter | SAMEA3472147_02703 | Not Available | Positive | 2816270 - 2817019 | 27113.0 |
| Major capsid protein precursor | SAMEA3472147_03840 | Not Available | Positive | 4014358 - 4015515 | 43098.9 |
| Prohead protease | SAMEA3472147_03841 | Not Available | Positive | 4015555 - 4016127 | 21574.5 |
| Attl | Not Available | Not Available | Positive | 4015980 - 4015991 | Not Available |
| Phage portal protein, hk97 family | SAMEA3472147_03842 | Not Available | Positive | 4016165 - 4017340 | 43772.8 |
| Putative head-tail adaptor | SAMEA3472147_03843 | Not Available | Positive | 4017337 - 4017675 | 12484.2 |
| Head-tail connector protein | SAMEA3472147_03844 | Not Available | Positive | 4017672 - 4017968 | 11106.4 |
| Hypothetical protein | SAMEA3472147_03845 | Not Available | Positive | 4017968 - 4018408 | 17205.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





