Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative short chain dehydrogenase | SAMEA3472147_00803 | Not Available | Positive | 877101 - 877859 | 27981.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3472147_00804 | Not Available | Positive | 877856 - 878446 | 22028.2 |
| 23s rrna pseudouridylate synthase b | SAMEA3472147_00805 | Not Available | Negative | 878486 - 879361 | 32713.4 |
| putative inner membrane protein | SAMEA3472147_00806 | Not Available | Negative | 879574 - 881475 | 71435.1 |
| putative rna binding protein | SAMEA3472147_00807 | Not Available | Negative | 881503 - 882123 | 23213.2 |
| putative phosphoesterase | SAMEA3472147_00808 | Not Available | Negative | 882120 - 883001 | 32611.8 |
| anthranilate synthase component i | SAMEA3472147_00810 | Not Available | Positive | 883275 - 884837 | 57615.8 |
| anthranilate synthase component ii | SAMEA3472147_00811 | Not Available | Positive | 884837 - 886432 | 56873.4 |
| tryptophan biosynthesis protein | SAMEA3472147_00812 | Not Available | Positive | 886436 - 887794 | 49305.9 |
| tryptophan synthase | SAMEA3472147_00813 | Not Available | Positive | 887806 - 888999 | 42999.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





