Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472147_00792 | Not Available | Negative | 865662 - 865970 | 11421.3 |
| phosphatidylglycerophosphatase b | SAMEA3472147_00793 | Not Available | Negative | 866119 - 866883 | 29040.8 |
| gtp cyclohydrolase ii | SAMEA3472147_00794 | Not Available | Positive | 867053 - 867643 | 21837.3 |
| aconitate hydratase 1 | SAMEA3472147_00795 | Not Available | Negative | 867707 - 870382 | 97730.8 |
| protein, c-ter fragment, truncated protein | SAMEA3472147_00797 | Not Available | Negative | 870755 - 870922 | 6338.19 |
| small predicted membrane protein | SAMEA3472147_00798 | Not Available | Negative | 870925 - 871053 | 4866.05 |
| hth-type transcriptional regulator cysb | SAMEA3472147_00799 | Not Available | Negative | 871384 - 872358 | 36152.5 |
| dna topoisomerase i | SAMEA3472147_00800 | Not Available | Negative | 872568 - 875165 | 97370.0 |
| protein | SAMEA3472147_00801 | Not Available | Positive | 875545 - 875796 | 9386.17 |
| protease | SAMEA3472147_00802 | Not Available | Negative | 875832 - 876881 | 39426.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





