Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | SAMEA3472147_00772 | Not Available | Positive | 843512 - 844477 | 36040.2 |
| peptide abc transporter permease | SAMEA3472147_00773 | Not Available | Positive | 844464 - 845354 | 31550.0 |
| peptide abc transporter atp-binding protein | SAMEA3472147_00774 | Not Available | Positive | 845354 - 846346 | 37662.9 |
| peptide abc transporter atp-binding protein | SAMEA3472147_00775 | Not Available | Positive | 846348 - 847154 | 30572.5 |
| drug transport transmembrane protein | SAMEA3472147_00776 | Not Available | Negative | 847205 - 848368 | 41422.1 |
| outer membrane efflux lipoprotein | SAMEA3472147_00777 | Not Available | Negative | 848377 - 849750 | 49240.2 |
| multidrug efflux protein | SAMEA3472147_00778 | Not Available | Negative | 849754 - 850878 | 40164.4 |
| multidrug efflux protein | SAMEA3472147_00779 | Not Available | Negative | 850939 - 852861 | 69231.9 |
| acriflavine resistance protein a precursor | SAMEA3472147_00780 | Not Available | Negative | 852861 - 853982 | 39761.0 |
| transcriptional repressor | SAMEA3472147_00781 | Not Available | Negative | 854131 - 854697 | 21828.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





