Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mandelate racemase/muconate lactonizing family protein | SAMEA3472147_00752 | Not Available | Negative | 823209 - 824174 | 34621.9 |
| thiol peroxidase | SAMEA3472147_00753 | Not Available | Positive | 824293 - 824799 | 17836.3 |
| dna-binding transcriptional regulator tyrr | SAMEA3472147_00754 | Not Available | Negative | 824843 - 826384 | 57679.5 |
| putative inner membrane protein | SAMEA3472147_00755 | Not Available | Negative | 826532 - 827593 | 39441.6 |
| putative atp-binding protein | SAMEA3472147_00756 | Not Available | Negative | 827590 - 828987 | 52625.6 |
| phage shock protein e (rhodanase-like protein) | SAMEA3472147_00757 | Not Available | Negative | 829106 - 829420 | 11504.0 |
| peripheral inner membrane phage-shock protein | SAMEA3472147_00758 | Not Available | Negative | 829495 - 829716 | 8042.22 |
| phage shock protein c | SAMEA3472147_00759 | Not Available | Negative | 829725 - 830084 | 13517.7 |
| phage shock protein b | SAMEA3472147_00760 | Not Available | Negative | 830084 - 830308 | 8763.59 |
| phage shock protein a | SAMEA3472147_00761 | Not Available | Negative | 830362 - 831030 | 25520.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





