Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response protein | SAMEA3472147_00697 | Not Available | Negative | 771555 - 771947 | 14182.0 |
| competence damage-inducible protein a | SAMEA3472147_00698 | Not Available | Positive | 772223 - 772741 | 18306.8 |
| dipeptidyl carboxypeptidase ii | SAMEA3472147_00699 | Not Available | Negative | 772786 - 774831 | 77490.8 |
| nadp-dependent l-serine/l-allo-threonine dehydrogenase | SAMEA3472147_00700 | Not Available | Positive | 774968 - 775714 | 27264.6 |
| gntr family transcriptional regulator | SAMEA3472147_00701 | Not Available | Positive | 775803 - 776489 | 26566.7 |
| selenium carrying protein | SAMEA3472147_00702 | Not Available | Positive | 776666 - 776869 | 7276.83 |
| putative sugar dehydrogenase | SAMEA3472147_00703 | Not Available | Negative | 776905 - 778365 | 53673.3 |
| metabolite transport protein ydfj | SAMEA3472147_00704 | Not Available | Negative | 778454 - 778972 | 18820.7 |
| aminobenzoyl-glutamate transporter | SAMEA3472147_00740 | Not Available | Positive | 811733 - 812512 | 28579.4 |
| methylated-dna--protein-cysteine methyltransferase | SAMEA3472147_00741 | Not Available | Positive | 812523 - 813038 | 19208.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





