Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aldolase | SAMEA3472147_00676 | Not Available | Positive | 753062 - 753937 | 31894.6 |
| autoinducer-2 (ai-2) modifying protein lsrg | SAMEA3472147_00677 | Not Available | Positive | 753960 - 754250 | 11255.4 |
| trans-aconitate methyltransferase | SAMEA3472147_00678 | Not Available | Positive | 754307 - 754831 | 19585.1 |
| trans-aconitate methyltransferase | SAMEA3472147_00679 | Not Available | Positive | 754866 - 755066 | 7869.47 |
| inner membrane protein | SAMEA3472147_00680 | Not Available | Negative | 755070 - 755984 | 34811.0 |
| altronate oxidoreductase | SAMEA3472147_00681 | Not Available | Negative | 756181 - 757632 | 54811.3 |
| putative signal transduction protein | SAMEA3472147_00682 | Not Available | Negative | 757859 - 759277 | 52210.5 |
| putative cytoplasmic protein | SAMEA3472147_00683 | Not Available | Negative | 759416 - 759775 | 13543.6 |
| glutaminase 2 | SAMEA3472147_00684 | Not Available | Negative | 759775 - 760701 | 33517.6 |
| succinate semialdehyde dehydrogenase | SAMEA3472147_00685 | Not Available | Negative | 760765 - 762153 | 49748.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





