Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rcsf--phosphorelay glucose and zinc sensor | SAMEA3753290_00422 | Not Available | Negative | 440639 - 441043 | 14164.3 |
| d-methionine-binding transport system metq precursor | SAMEA3753290_00423 | Not Available | Negative | 441161 - 441976 | 29419.2 |
| d-methionine abc transporter permease | SAMEA3753290_00424 | Not Available | Negative | 442016 - 442669 | 23257.6 |
| d-methionine abc transporter atp-binding protein | SAMEA3753290_00425 | Not Available | Negative | 442662 - 443693 | 37804.7 |
| d,d-heptose 1,7-bisphosphate phosphatase | SAMEA3753290_00426 | Not Available | Positive | 443881 - 444453 | 21167.3 |
| rhsc element core protein rshc | SAMEA3753290_00427 | Not Available | Positive | 444864 - 446930 | 79018.6 |
| inner membrane protein | SAMEA3753290_00428 | Not Available | Positive | 446930 - 447256 | 12558.1 |
| rhsc element core protein rshc | SAMEA3753290_00429 | Not Available | Positive | 447374 - 448807 | 55249.9 |
| protein | SAMEA3753290_00430 | Not Available | Positive | 448804 - 449373 | 21962.6 |
| transposase | SAMEA3753290_00431 | Not Available | Positive | 449600 - 449854 | 9567.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





