Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SAMEA3753290_00351 | Not Available | Positive | 364861 - 365787 | 34649.2 |
| inner membrane transport permease yadh | SAMEA3753290_00352 | Not Available | Positive | 365784 - 366554 | 28517.9 |
| pts system transporter subunit iia | SAMEA3753290_00353 | Not Available | Positive | 366659 - 367099 | 16541.0 |
| putative polysaccharide deacetylase | SAMEA3753290_00354 | Not Available | Positive | 367163 - 368392 | 46341.9 |
| aspartate l-decarboxylase | SAMEA3753290_00355 | Not Available | Negative | 368396 - 368776 | 13834.5 |
| transposase yhga family protein | SAMEA3753290_00356 | Not Available | Positive | 369050 - 369952 | 34694.9 |
| pantoate--beta-alanine ligase | SAMEA3753290_00357 | Not Available | Negative | 370026 - 370877 | 31599.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMEA3753290_00358 | Not Available | Negative | 370889 - 371683 | 28109.0 |
| fimbrial-like adhesin protein | SAMEA3753290_00359 | Not Available | Negative | 371796 - 373070 | 46411.3 |
| fimbrial-like adhesin protein | SAMEA3753290_00360 | Not Available | Negative | 373123 - 373719 | 21451.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





