Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein transport protein hofb | SAMEA3753290_00330 | Not Available | Negative | 337953 - 339338 | 50455.2 |
| prepilin peptidase dependent protein d precursor | SAMEA3753290_00331 | Not Available | Negative | 339348 - 339788 | 15603.6 |
| quinolinate phosphoribosyltransferase | SAMEA3753290_00332 | Not Available | Negative | 339991 - 340884 | 32764.0 |
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3753290_00333 | Not Available | Positive | 340972 - 341523 | 20537.2 |
| ampe protein | SAMEA3753290_00334 | Not Available | Positive | 341520 - 342374 | 32123.9 |
| aromatic amino acid transport protein | SAMEA3753290_00335 | Not Available | Negative | 342417 - 343787 | 49561.9 |
| transcriptional regulator protein | SAMEA3753290_00336 | Not Available | Positive | 344331 - 345095 | 29427.2 |
| pyruvate dehydrogenase e1 component | SAMEA3753290_00338 | Not Available | Positive | 345256 - 347919 | 99674.1 |
| dihydrolipoamide acetyltransferase component (e2) of pyruvate dehydrogenase | SAMEA3753290_00339 | Not Available | Positive | 347934 - 349826 | 66099.8 |
| dihydrolipoamide dehydrogenase | SAMEA3753290_00340 | Not Available | Positive | 350034 - 351458 | 50691.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





