Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-like protein | SAMEA3753290_00235 | Not Available | Negative | 228479 - 229162 | 25182.9 |
| metal dependent hydrolase | SAMEA3753290_00236 | Not Available | Negative | 229239 - 229742 | 19456.6 |
| putative enzyme | SAMEA3753290_00237 | Not Available | Positive | 229827 - 230963 | 42350.9 |
| putative dna-binding protein | SAMEA3753290_00238 | Not Available | Positive | 231234 - 231650 | 14996.3 |
| 2,4-dienoyl-coa reductase | SAMEA3753290_00239 | Not Available | Negative | 231695 - 233713 | 72785.7 |
| glycosyl hydrolase | SAMEA3753290_00240 | Not Available | Negative | 234039 - 236390 | 88403.7 |
| uncharacterised protein | SAMEA3753290_00241 | Not Available | Negative | 236407 - 237477 | 40101.5 |
| putative amino acid permease | SAMEA3753290_00242 | Not Available | Negative | 237611 - 239044 | 52175.7 |
| evolved beta-galactosidase subunit beta | SAMEA3753290_00243 | Not Available | Negative | 239107 - 239556 | 17457.6 |
| cryptic beta-d-galactosidase subunit alpha | SAMEA3753290_00244 | Not Available | Negative | 239553 - 242645 | 117860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





