Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyglucarate aldolase | SAMEA3753290_00194 | Not Available | Positive | 186821 - 187591 | 27428.7 |
| tartronate semialdehyde reductase | SAMEA3753290_00195 | Not Available | Positive | 187621 - 188511 | 30661.6 |
| glycerate kinase | SAMEA3753290_00196 | Not Available | Positive | 188608 - 189753 | 39136.7 |
| uncharacterised protein | SAMEA3753290_00198 | Not Available | Negative | 190755 - 191858 | 41759.5 |
| protein | SAMEA3753290_00199 | Not Available | Negative | 191880 - 192419 | 20577.6 |
| tdc operon transcriptional activator | SAMEA3753290_00200 | Not Available | Positive | 193208 - 194146 | 34540.9 |
| catabolic threonine dehydratase | SAMEA3753290_00201 | Not Available | Positive | 194245 - 195234 | 35234.5 |
| threonine/serine transporter | SAMEA3753290_00202 | Not Available | Positive | 195256 - 196587 | 48881.8 |
| propionate kinase/acetate kinase c, anaerobic | SAMEA3753290_00203 | Not Available | Positive | 196613 - 197821 | 43386.7 |
| keto-acid formate acetyltransferase | SAMEA3753290_00204 | Not Available | Positive | 197855 - 200149 | 85940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





