Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3753290_05725 | Not Available | Negative | 5698730 - 5700343 | 61354.5 |
| transposase | SAMEA3753290_05726 | Not Available | Negative | 5700374 - 5700724 | 13214.2 |
| transposase | SAMEA3753290_05727 | Not Available | Negative | 5700721 - 5701155 | 16147.5 |
| uncharacterised protein | SAMEA3753290_05728 | Not Available | Negative | 5701535 - 5701735 | 7354.25 |
| uncharacterised protein | SAMEA3753290_05729 | Not Available | Negative | 5701929 - 5702216 | 10524.9 |
| cp4-57 prophage protein | SAMEA3753290_05730 | Not Available | Positive | 5703551 - 5705035 | 55746.4 |
| uncharacterised protein | SAMEA3753290_05731 | Not Available | Negative | 5705357 - 5705959 | 23690.5 |
| putative regulatory protein | SAMEA3753290_05732 | Not Available | Negative | 5706054 - 5706260 | 7771.56 |
| toxin of the rele-relb toxin-antitoxin system | SAMEA3753290_05733 | Not Available | Negative | 5706928 - 5707209 | 11006.5 |
| putative antitoxin of toxin-antitoxin system | SAMEA3753290_05734 | Not Available | Negative | 5707199 - 5707450 | 9194.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





