Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation inhibitor protein raia | SAMEA3753290_05692 | Not Available | Negative | 5664524 - 5664865 | 12785.3 |
| outer membrane protein assembly complex subunit yfio | SAMEA3753290_05693 | Not Available | Negative | 5665136 - 5665873 | 27830.9 |
| 23s rrna pseudouridine synthase | SAMEA3753290_05694 | Not Available | Positive | 5666008 - 5666988 | 37123.9 |
| putative inner membrane protein | SAMEA3753290_05695 | Not Available | Positive | 5666985 - 5667716 | 26299.3 |
| protein disaggregation chaperone | SAMEA3753290_05696 | Not Available | Positive | 5667846 - 5670419 | 95590.8 |
| is91, orf2 | SAMEA3753290_05698 | Not Available | Negative | 5671785 - 5672150 | 13761.2 |
| is91, transposase, truncation | SAMEA3753290_05699 | Not Available | Negative | 5672427 - 5672771 | 13681.2 |
| is91, orf2 | SAMEA3753290_05700 | Not Available | Negative | 5672771 - 5673136 | 13761.2 |
| yifn | SAMEA3753290_05702 | Not Available | Negative | 5673559 - 5674032 | 17280.1 |
| uncharacterised protein | SAMEA3753290_05703 | Not Available | Negative | 5674823 - 5674918 | 3432.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





