Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alcohol dehydrogenase (partial) | SAMEA3753290_05681 | Not Available | Negative | 5654955 - 5655059 | 3626.4 |
| uncharacterised protein | SAMEA3753290_05683 | Not Available | Negative | 5656610 - 5656936 | 12380.8 |
| plasmid sos inhibition protein a | SAMEA3753290_05684 | Not Available | Negative | 5656936 - 5657988 | 40169.7 |
| parb-like nuclease | SAMEA3753290_05685 | Not Available | Negative | 5658043 - 5660001 | 71279.9 |
| conserved putative protein | SAMEA3753290_05686 | Not Available | Negative | 5660065 - 5660298 | 9074.63 |
| single-stranded dna-binding protein | SAMEA3753290_05687 | Not Available | Negative | 5660354 - 5660884 | 19556.0 |
| yubn | SAMEA3753290_05688 | Not Available | Positive | 5660949 - 5661452 | 18197.7 |
| adenine-specific dna methylase | SAMEA3753290_05689 | Not Available | Negative | 5661722 - 5662285 | 21106.8 |
| domain of uncharacterised function (duf3560) | SAMEA3753290_05690 | Not Available | Negative | 5662332 - 5663693 | 51889.3 |
| methyltransferase | SAMEA3753290_05691 | Not Available | Positive | 5663872 - 5664372 | 18175.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





