Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21 family transposase | SAMEA3753290_05565 | Not Available | Negative | 5566852 - 5568024 | 45841.9 |
| uncharacterised protein | SAMEA3753290_05566 | Not Available | Positive | 5568065 - 5568187 | 4276.1 |
| yaca | SAMEA3753290_05567 | Not Available | Positive | 5568291 - 5568560 | 10253.2 |
| yacb | SAMEA3753290_05568 | Not Available | Positive | 5568557 - 5568838 | 10894.2 |
| orthopoxvirus protein of uncharacterised function (duf830) | SAMEA3753290_05569 | Not Available | Positive | 5569102 - 5570289 | 45272.5 |
| sefir domain | SAMEA3753290_05570 | Not Available | Positive | 5570378 - 5571289 | 35199.3 |
| plasmid stable inheritance protein (parb family) | SAMEA3753290_05571 | Not Available | Negative | 5571431 - 5571826 | 14774.7 |
| plasmid stable inheritance protein (para family) | SAMEA3753290_05572 | Not Available | Negative | 5571826 - 5572785 | 35497.4 |
| uncharacterised protein | SAMEA3753290_05573 | Not Available | Positive | 5572836 - 5573003 | 6177.62 |
| yfda | SAMEA3753290_05574 | Not Available | Positive | 5573200 - 5574126 | 34935.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





