Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase orf a, is911 | SAMEA3753290_05544 | Not Available | Negative | 5551338 - 5551640 | 11739.1 |
| putative polysaccharide deacetylase | SAMEA3753290_05545 | Not Available | Positive | 5551847 - 5552668 | 32296.6 |
| glycosyl transferase family protein | SAMEA3753290_05546 | Not Available | Positive | 5552671 - 5553759 | 40749.6 |
| virulence protein | SAMEA3753290_05547 | Not Available | Positive | 5554196 - 5554714 | 19863.1 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3753290_05548 | Not Available | Positive | 5554779 - 5555723 | 36446.8 |
| is600 orfab' transposase | SAMEA3753290_05549 | Not Available | Positive | 5555904 - 5557013 | 42588.9 |
| is66 family transposase orfb | SAMEA3753290_05550 | Not Available | Positive | 5557219 - 5557932 | 26680.5 |
| zinc-binding alcohol dehydrogenase | SAMEA3753290_05551 | Not Available | Negative | 5557853 - 5558224 | 13002.7 |
| heat stable enterotoxin ii stb | SAMEA3753290_05553 | Not Available | Negative | 5559649 - 5559864 | 7619.33 |
| is1 transposase | SAMEA3753290_05554 | Not Available | Positive | 5560070 - 5560345 | 9881.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





