Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| usher protein | SAMEA3753290_05504 | Not Available | Negative | 5514607 - 5515203 | 22889.7 |
| t3ss effector espx | SAMEA3753290_05505 | Not Available | Negative | 5515636 - 5515923 | 11285.8 |
| t3ss effector protein espx | SAMEA3753290_05506 | Not Available | Negative | 5515947 - 5517056 | 43397.6 |
| 30s ribosomal protein s20 | SAMEA3753290_05507 | Not Available | Negative | 5517540 - 5517803 | 9684.94 |
| riboflavin biosynthesis protein | SAMEA3753290_05508 | Not Available | Positive | 5518132 - 5519073 | 34736.4 |
| isoleucyl-trna synthetase | SAMEA3753290_05509 | Not Available | Positive | 5519116 - 5521932 | 104302.0 |
| lipoprotein signal peptidase | SAMEA3753290_05510 | Not Available | Positive | 5521932 - 5522426 | 18129.3 |
| fkbb-type 16 kd peptidyl-prolyl cis-trans isomerase | SAMEA3753290_05511 | Not Available | Positive | 5522551 - 5523000 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMEA3753290_05512 | Not Available | Positive | 5523002 - 5523952 | 34721.5 |
| nonspecific ribonucleoside hydrolase (purine/pyrimidine ribonucleoside hydrolase) | SAMEA3753290_05513 | Not Available | Positive | 5524018 - 5524932 | 32547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





